miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|29637900|gb|CB642909.1|CB642909 GACAAAGCTGGGTACCGGGCCCCCCCTCGAGTTTTTTTTCCTTTAAAGTACTAAAATACTTTATCTGGTTTATATTATAA
CATTTTCTAGCATTGTCTACATTCATATATAGGTGCCTAGATTCATTAACATCTATATGAATGTGGACAATATTAAAAAG
TTTTATAACCTAAAACGGAGGTAGTATATTTCATTCATCTAAAATCATTTATATTTTGAGGTGGACGAAGCAATTCTAAA
TCACCCCCAGCTGGATCGATCGATCTGCCTCTTAACCGACACGGGCAAAATCGCATCACGGGCGCGCTGGCACCGGCACC
GGCACGGCCTTGAGCGGCGTGACCATGTTGAGCGACGTGCCGAACCGGCCCCTGACATCGACGTCGCACGGCCGCATCCC
GCCGGGGAGCCGCCACTCGAACGCGTGGAGCAGCGACGCCAACACCAGCGTCACCACCCTCGTCGCCATCGGAGTCCCCG
GGCACGCCCTCCTCCCCGCCCCGAACGGCATGAACTCCAGCATCTCGCCGCCGCGGAACGACCCGCCGGACGCGACGAAG
CGCTCCGGCTCGAACTCCTCCGGGCGAGGCCACGACGCCGGGTCGCGCATGATGGACCACACGTTGACGATCACCTTAGT
GCCCCTGGGCACCGCGTATCCGCCGACCGCGGCGCCGTCGGCGACGGCCTCGTGCGGTATCAGCAGCGGGCTCGGCGGGT
G




Most similar to sp|O64637|C76C2_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|O64637|C76C2_ARATH Cytochrome P450 76C2 OS=Arabidopsis thaliana
           GN=CYP76C2 PE=2 SV=1
          Length = 512

 Score =  100 bits (250), Expect = 8e-21
 Identities = 54/132 (40%), Positives = 74/132 (56%)
 Frame = -1

Query: 721 HPPSPLLIPHEXXXXXXXXXXXXVPRGTKVIVNVWSIMRDPASWXXXXXXXXXXFVASGG 542
           HP +PLL+P +             P+ T+V VNVW+I RDP  W          F+    
Sbjct: 374 HPAAPLLVPRKAESDVEVLGFMV-PKDTQVFVNVWAIGRDPNVWENSSRFKPERFLGKDI 432

Query: 541 SFRGGEMLEFMPFGAGRRACPGTPMATRVVTLVLASLLHAFEWRLPGGMRPCDVDVRGRF 362
             RG +  E  PFGAGRR CPG P+A + V L+LASLL++F+W+LP G+   D+D+   F
Sbjct: 433 DLRGRDY-ELTPFGAGRRICPGLPLAVKTVPLMLASLLYSFDWKLPNGVGSEDLDMDETF 491

Query: 361 GTSLNMVTPLKA 326
           G +L+   PL A
Sbjct: 492 GLTLHKTNPLHA 503